dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03966
Location and strand information: 729 - 1901 (-)
Family: 9.B.34.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03967
Location and strand information: 2783 - 3229 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03968
Location and strand information: 3802 - 5685 (+)
Family: 8.A.59.2.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03969
Location and strand information: 5697 - 7229 (+)
Family: HTH_AraC+HTH_AraC
Protein type: TF
Protein description: Regulator of RpoS

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03970
Location and strand information: 7418 - 8671 (+)
Family: SBP_bac_1
Protein type: STP
Protein description: hypothetical protein

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03971
Location and strand information: 9366 - 10274 (+)
Family: 3.A.1.1.7
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03972
Location and strand information: 10274 - 11119 (+)
Family: 3.A.1.1.41
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03973
Location and strand information: 11262 - 13289 (+)
Family: GH31
Protein type: CAZyme
Protein description: hypothetical protein
Protein isoelectric point: 5.0558
Protein molecular weight: 77818.62
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03974
Location and strand information: 13492 - 14355 (+)
Family: 3.A.1.3.27
Protein type: TC
Protein description: Membrane-bound lytic murein transglycosylase F

Gene clsuter ID: MGYG000004667_77|CGC1
Gene ID: MGYG000004667_03975
Location and strand information: 15128 - 16495 (+)
Family: 2.A.3.1.16
Protein type: TC
Protein description: D-serine/D-alanine/glycine transporter

You are here: cgc-> ?help

CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is starch download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000004667_03966	hypothetical protein	TC	729	1901	-	9.B.34.1.3
MGYG000004667_03967	hypothetical protein	null	2783	3229	+	4HBT
MGYG000004667_03968	hypothetical protein	TC	3802	5685	+	8.A.59.2.1
MGYG000004667_03969	Regulator of RpoS	TF	5697	7229	+	HTH_AraC+HTH_AraC
MGYG000004667_03970	hypothetical protein	STP	7418	8671	+	SBP_bac_1
MGYG000004667_03971	Lactose transport system permease protein LacF	TC	9366	10274	+	3.A.1.1.7
MGYG000004667_03972	L-arabinose transport system permease protein AraQ	TC	10274	11119	+	3.A.1.1.41
MGYG000004667_03973	hypothetical protein	CAZyme	11262	13289	+	GH31
MGYG000004667_03974	Membrane-bound lytic murein transglycosylase F	TC	13492	14355	+	3.A.1.3.27
MGYG000004667_03975	D-serine/D-alanine/glycine transporter	TC	15128	16495	+	2.A.3.1.16
Protein ID	Protein Name	Type	Start	End	Strand	Signature